PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.Z57SD
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 593aa    MW: 66387.2 Da    PI: 4.4094
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.Z57SDgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM146.91.1e-4561242128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                   pGfrFhPtd+elv++yL++kv gk ++  ++i  ++iy++ePw+Lp      + ewyfF+  dkky++g++++rat +gyWk+tgkd+ ++  ++++
  Araip.Z57SD   6 GPGFRFHPTDDELVQYYLRRKVIGKLNHH-DHIGVINIYDYEPWQLP------DLEWYFFTVLDKKYEKGEKTKRATVNGYWKTTGKDRGIKY-GDRQ 95 
                  59**********************99887.89**************9......579*************************************.999* PP

          NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                  vg+kktLv+++grap+g++++Wvmheyr+
  Araip.Z57SD  96 VGMKKTLVYHEGRAPTGKRSNWVMHEYRM 124
                  ***************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.84E-485165IPR003441NAC domain
PROSITE profilePS5100550.2045165IPR003441NAC domain
PfamPF023652.2E-267124IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009644Biological Processresponse to high light intensity
GO:0009962Biological Processregulation of flavonoid biosynthetic process
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 593 aa     Download sequence    Send to blast
MSRILGPGFR FHPTDDELVQ YYLRRKVIGK LNHHDHIGVI NIYDYEPWQL PDLEWYFFTV  60
LDKKYEKGEK TKRATVNGYW KTTGKDRGIK YGDRQVGMKK TLVYHEGRAP TGKRSNWVMH  120
EYRMVDEQLA EVGYQLSQGL FVLVYLCFWW WWAKDAFVLC RIFEKSGMGP KNGEKYGAPF  180
REEDWVEDGD LLEPIADEPV VELSVDQSDA FLETDDLEKK LGTHVVDGSA DLPPNPPNYF  240
YGECSHYPQH QEEFVEVPKP LEGTEGRNFD VTGPYAEDTC LENHEMNHNG NSSGFIYGDV  300
NSDEIMDSIV DPLIGAELFL ETDDLLNPIE GNSSGADPYT VEGNHPRADP YAAEGNPPGP  360
DPYTAEGNYP GTDPYAVDML DEYLALPDDD ILRYISFDDS PPSMEGENPI LEQIPPLIQQ  420
NVEEEAKDVS EEKQQKVEGE ATNIFKTNKH DLEANSSRGG SASDDANPIA KRFKKWLEDI  480
PAAPAFAAEL PSKKDALQLH SAPQSSNTTH VTAGMVSITN ITGRGNDMNP MVAKIGGGFN  540
HPIISAVVLI PVSGLLCGKT LFVLTYGWAF LVTFSFLFAT VTCKIGTFMY SGK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-34512415140Stress-induced transcription factor NAC1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00059PBMTransfer from AT5G04410Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016175325.10.0PREDICTED: NAC domain-containing protein 53-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF53473247
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.12e-83NAC domain containing protein 2